The CUBIC wiki hosts a wealth of information to help you design, run, analyse and share your MRI experiments. General information on the centre can be found on the CUBIC website.
This wiki is a shared resource for knowledge exchange which all registered users can contribute to (and indeed are strongly encouraged to do so). With the exception of policy and procedure documents, users can edit most of the sections below (if you can see a pen icon on the right-hand side of the page, it means you have permission to modify that page).
⚠️Wikis rely on users to keep up to date – if you note something is incorrect or has changed, please add a note to the relevant section below. Equally, if you have expertise or knowledge about particular procedures, equipment, or practices, please share them with others here!
⚠️ Important updates (e.g., changes in procedures) or error reports should be added to Important updates page, as well as to the relevant section below (where applicable).
⚠️ The Wiki is still under construction, so many sections will be incomplete or non-existent; please bear with us and feel free to contribute!
⚠️ Please note that the subscription function for forums and updates is not yet working (due to Microsoft’s email service classifying wiki emails as spoofing – Central IT is working on a fix).
Please report any issues or errors with the wiki to Carl.Hodgetts@rhul.ac.uk.
Find out more about how to use and update the wiki here.
CUBIC community
- How to use/update the CUBIC wiki
- Important updates
- User discussion forum
- Tips and tricks
- Participants and APs wanted or available
- Scan cancellations & time swap forum
- New starter guide
- Monthly neuroscience meetings
- CUBIC Conference
- CUBIC mailing list
- CUBIC skills database
- People and roles
Facilities and sequences
- How to find us
- Our 3T MRI Scanner
- Standard sequences
- Developing/installing new sequences
- Stimulus presentation
- Peripheral equipment
- Computing cluster and data storage
- How to download data from the scanner
How to start a new study
Compulsory procedure
Training and safety
Basic MRI procedures
- Summary of key procedures and rules
- Scanner booking policy (RHUL users)
- MRI charges and cancellation policy (RHUL users)
- Non-RHUL users: consult your CUBIC representative
- 🌐 Scanner booking system
- 📄 CUBIC Rules of Operation
- 📄 Static field risk assessment
- 📄 Risk assessment (others)
Participant procedures
- Participant recruitment
- Incidental finding protocol
- ⚠️ Public data sharing (Under construction)
- ⚠️ Sharing brain images with participants (Under construction)
- ⚠️ Participant parking bays (Under construction)
Forms
Computing and analysis resources
- Guide to the RHUL computing cluster
- Methods training at RHUL
- Using the cluster and HPC facilities
- 📄 User Guide for the New Cluster
- ⚠️ Linux survival guide (Under construction)
- Software for neuroimaging
- Open MRI datasets
- Stimulus generation software
- Brain anatomy resources
- BIDS neuroimaging data format